At a meeting in Queensborough Community College in New York in March 2003, a guest speaker named Faheed declared, "We reject the U.N., reject America, reject all law and order. Don't lobby Congress or protest because we don't recognize Congress. The only relationship you should have with America is to topple it … Eventually there will be a Muslim in the White House dictating the laws of Shariah."
During an October 2000 anti-Israeli protest, former MSA president Ahmed Shama at the University of California, Los Angeles (UCLA) stood before the Israeli consulate in Los Angeles, shouting "Victory to Islam! Death to the Jews!" MSA West president Sohail Shakr declared at the same rally, "the biggest impediment to peace [in the Middle East] has been the existence of the Zionist entity in the middle of the Muslim world."
Prior to September 11, 2001, the MSA formally assisted three Islamic charities in fundraising: the Holy Land Foundation, Global Relief, and Benevolence Foundation. After that date, all three were accused by the Federal Bureau of Investigation (FBI) of having serious links to terrorism and were ordered closed. The MSA issued a formal statement of protest: "How three of the nation's largest Muslim charities could be made inoperable at the peak of the giving season of Ramadan seemed unbelievable."